Data Science and stuff

Welcome to Tsuda Lab, Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, at The University of Tokyo.

Our areas of research include machine learning, data mining, statistical science and their applications to molecular biology, protein science, organic chemistry, materials science and related fields.

Recent Publications

Trajectory analysis reveals an uncommitted neuroblastic state in MYCN-driven neuroblastoma development

Shoma Tsubota, Daniel R Carter, Janith A Seneviratne, Haruka Hirose, Teppei Shimamura, Yukie Kashima, Yutaka Suzuki, Koji Tsuda, Glenn M Marshall, Kenji Kadomatsu
DOI

Discovery and affinity maturation of antibody fragments from an unfavorably enriched phage display selection by deep sequencing and machine learning

Sakiya Kawada, Yoichi Kurumida, Tomoyuki Ito, Thuy Duong Nguyen, Hafumi Nishi, Hikaru Nakazawa, Yutaka Saito, Tomoshi Kameda, Koji Tsuda, Mitsuo Umetsu
DOI

Human–AI collaboration for modeling heat conduction in nanostructures

Wenyang Ding, Jiang Guo, Meng An, Koji Tsuda, Junichiro Shiomi
DOI
See all publications

Contact

  • tsudak.u-tokyo.ac.jp
  • 04-7136-3983
  • 5-1-5 Kashiwa-no-ha, Kashiwa-shi, Chiba-ken, 277-8561, Japan
  • From Kashiwanoha-campus station (Tsukuba Express line): take the bus to Kokuritsu Gan Kenkyū Center or Todai-mae.